BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006H07LP1|AL425602
(1052 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1149 1885 0.0
>3x_Contig1149
Length = 5603
Score = 1885 bits (948), Expect = 0.0
Identities = 968/972 (99%), Gaps = 2/972 (0%)
Strand = Plus / Minus
Query: 1 gatcccacgcaataggcgaaatatcaattacaattacacatcaccgaatttaaaataagg 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2181 gatcccacgcaataggcgaaatatcaagtacaattacacatcaccgaatttaaaataagg 2122
Query: 61 tgagttatccacagataatcagccttttaccatgcctaaaggaattgcccgtgtggatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2121 tgagttatccacagataatcagccttttaccatgcctaaaggaattgcccgtgtggatga 2062
Query: 121 gaaagtttcagtaaaggcgtcattgccagatttgcgatttgaacagacctttaagcagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2061 gaaagtttcagtaaaggcgtcattgccagatttgcgatttgaacagacctttaagcagtc 2002
Query: 181 cttgaggaaagaagctttgaaacagaataaattaactctatcggtggctgatggatctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2001 cttgaggaaagaagctttgaaacagaataaattaactctatcggtggctgatggatctgt 1942
Query: 241 cgtagatcctcccattacaccatatatcgttgcaaaagttgttgctagagatattttgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1941 cgtagatcctcccattacaccatatatcgttgcaaaagttgttgctagagatattttgat 1882
Query: 301 aagtccatttttgcagggtgtctttctctcgttattttatatcgttgccaagccatggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1881 aagtccatttttgcagggtgtctttctctcgttattttatatcgttgccaagccatggtt 1822
Query: 361 acaatattgcagacaagcaggacgtaatattggcagaagtataattaggaacttatttgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1821 acaatattgcagacaagcaggacgtaatattggcagaagtataattaggaacttatttgg 1762
Query: 421 taagaatgcgatatacaggccaccaagaaacatataactgaacttcttctcctagggatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1761 taagaatgcgatatacaggccaccaagaaacatataactgaacttcttctcctagggatt 1702
Query: 481 atagaaggattaggatactattaacacgaattctcttgtcgtcgttctgttccttcttcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1701 atagaaggattaggatactattaacacgaattctcttgtcgtcgttctgttccttcttcg 1642
Query: 541 tcaaacagaaacgacgataatctatatagtaaaatataaactaacttagtatgatgatga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1641 tcaaacagaaacgacgataatctatatagtaaaatataaactaacttagtatgatgatga 1582
Query: 601 tttaatgtacattacgaccaaaaccaacactttatttctttcatacgctctgatagttcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1581 tttaatgtacattacgaccaaaaccaacactttatttctttcatacgctctgatagttcg 1522
Query: 661 cagtaatccaagaataacattaccaggcatgcaatatagaacaggattaggtagtgaaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1521 cagtaatccaagaataacattaccaggcatgcaatatagaacaggattaggtagtgaaag 1462
Query: 721 ctgtgttccgccaccgttttttccaaataacgaactcatgaatctattccagagcgatag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1461 ctgtgttccgccaccgttttttccaaataacgaactcatgaatctattccagagcgatag 1402
Query: 781 taagtgaaggttgggaaggtattggctttgtatcattattatttgttatttttgtactga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1401 taagtgaaggttgggaaggtattggctttgtatcattattatttgttatttttgtactga 1342
Query: 841 gtaaaaatttcggagtcatggtcattaagtgaattgtctggaaccaccacggacaaattc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1341 gtaaaaatttcggagtcatggtcattaagtgaattgtctggaaccaccacggacaaattc 1282
Query: 901 gaggatcttccaaccttcggtttccttatcgtcgacagtmtctggat-cctggtg-aaac 958
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 1281 gaggatcttccaaccttcggtttccttatcgtcgacagtttctggatccctggtgaaaac 1222
Query: 959 catggcgtaaga 970
||||||||||||
Sbjct: 1221 catggcgtaaga 1210
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7523
Number of Sequences: 1807
Number of extensions: 7523
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 1052
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1036
effective length of database: 10,329,639
effective search space: 10701506004
effective search space used: 10701506004
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)